Use affinity propagation to cluster similar gene sets to reduce redundancy in report.
Usage
affinityPropagation(idsInSet, score)
Arguments
- idsInSet
A list of set names and their member IDs.
- score
A vector of addible scores with the same length used to assign input preference;
higher score has larger weight, i.e. -logP.
Value
A list of clusters and representatives for each cluster.
- clusters
A list of character vectors of set IDs in each cluster.
- representatives
A character vector of representatives for each cluster.
Author
Zhiao Shi, Yuxing Liao
